PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941180.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 733aa    MW: 81539.4 Da    PI: 4.8071
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941180.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.5e-5291421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp GfrFhPtdeelv++yLk+k++g+  +  evi+evd++k+ePwdLp k  +++++ ew+fF+++d+kya+g+r+nrat++gyWkatgkd+ + 
  XP_010941180.1   9 LPLGFRFHPTDEELVNHYLKRKITGRIKSDVEVIPEVDVCKCEPWDLPdKsIIRSDDLEWFFFAPKDRKYANGHRSNRATEAGYWKATGKDRVIR 103
                     699***********************988889***************96435566777************************************* PP

             NAM  94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     sk    +++++g+kktLvf++grapkg +t+W+mheyr 
  XP_010941180.1 104 SKaaaaGHNVIGMKKTLVFHRGRAPKGIRTHWIMHEYRT 142
                     *988888888***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-594163IPR003441NAC domain
PROSITE profilePS5100557.2449163IPR003441NAC domain
PfamPF023653.1E-2710141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    Send to blast
MTAIALELLP LGFRFHPTDE ELVNHYLKRK ITGRIKSDVE VIPEVDVCKC EPWDLPDKSI  60
IRSDDLEWFF FAPKDRKYAN GHRSNRATEA GYWKATGKDR VIRSKAAAAG HNVIGMKKTL  120
VFHRGRAPKG IRTHWIMHEY RTTEPEFESG VQGGYVLYRL FKKSEEKSSN AKADEMDRSC  180
FSPTPAKLSP DDTQHEEDVM EEIATPLDQE SSDSVLQEGP HSLPDSVEQQ PAGIQIWLAD  240
ETDRSTTYSV KPDDSSCNIA SDNCDAKAGM HADPLQDVSA QYRDPHYEHI DSNGFPNIGS  300
PVLPYPDYFF GNMNHGSDTG YVNNADKDPL NEFLIAVLSN QDDYSSGASN VQKDSVAETL  360
PRHSIWDSAS CRDSRTSSEI DTEATLPQEL LGVEASKSFE GSSFLLNDPL RMDSLDGYPE  420
IEPQLSALYE NAYVLPYDGT GPDVCSVDSE SLQDLFNSME EPSNLKNVAN NGDRLEGAGI  480
SFRARRPQHP SNSDNKFAHQ GTAARRIRLQ GSTPKELFFS ADSESSCNKD DHEDKEAMKK  540
ALQDLFVGTE ESLTEKNTPS NEDGLEGTGI EIRARQTQHL PRLKKLSSKQ GTAVRRIRLQ  600
AHFEVGTFSS TVGELSSSKD DHEHKESMTE SLQAGEHVDD NIANLGEISK PALPDKLEQL  660
PVHDNAPPAS ELCLESKPTL RLRTKRTDDN ANTPEDPPRG RIPRSASVVY VIWLVLSVIL  720
VLMCVGIWRC ISS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B1e-42916317165NAC domain-containing protein 19
4dul_A1e-42916317165NAC domain-containing protein 19
1ut7_B1e-42916317165NO APICAL MERISTEM PROTEIN
1ut7_A1e-42916317165NO APICAL MERISTEM PROTEIN
1ut4_B1e-42916317165NO APICAL MERISTEM PROTEIN
1ut4_A1e-42916317165NO APICAL MERISTEM PROTEIN
3swp_D1e-42916320168NAC domain-containing protein 19
3swp_C1e-42916320168NAC domain-containing protein 19
3swp_B1e-42916320168NAC domain-containing protein 19
3swp_A1e-42916320168NAC domain-containing protein 19
3swm_D1e-42916320168NAC domain-containing protein 19
3swm_C1e-42916320168NAC domain-containing protein 19
3swm_B1e-42916320168NAC domain-containing protein 19
3swm_A1e-42916320168NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941180.10.0PREDICTED: uncharacterized protein LOC105059551 isoform X1
TrEMBLM0U6680.0M0U668_MUSAM; Uncharacterized protein
TrEMBLM0SAK10.0M0SAK1_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP04060_0010.0(Musa acuminata)
STRINGGSMUA_Achr3P00330_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.24e-72NAC 014